iomgaa
9a916c65a5
任务书 01 遗留修复（C14）： - library 新增 check_key_image(path)：关键图能逐像素保真重编码时返回 None，否则返回原因； _write_clean_png 的判断移过去，自身保留断言性质报错（走到这里说明 build 漏了检查）。 - build 写库前对每例调用，返回原因的整例跳过，记 C14「关键图能原样重编码」，涉及值写原因。 - 原来三条「关键图格式不对整次构建停下」的测试改为整例跳过，另加非 PNG、library 漏检报错两条。 - 结构.md 第八部分、guides/装配两个库.md 相应几行改掉。 第一阶段（src/cadx/ceus/）： - 照搬旧 geometry、video_decoder、research_config、split_screen、green_prompt、prompt_frames、 mapping，去掉产品层，注释改中文。 - 配置类去掉全部默认值，strict、extra=forbid、frozen；新建 config/ceus.yaml（paths、ceus 两段）， 数值照抄旧 yaml，逐项注明出处。删去 source_view/target_view、effective_region、mapping 锚点； 旧代码写死的分屏抽帧数 25 和搜索区间 (0.35, 0.65) 改成配置，值不变。 - 视频解码改为按路径用 cv2 逐帧读。 - 坐标换算改为两个视图矩形左上角之差，不再用按某种宽度写死的锚点。 - 造影画面在哪一半：两半各自选提示帧，恰好一半有才定，否则抛 ContrastSideError（CeusCaseError 子类，带步号和原因，供第三阶段记 failed.csv）。 - 旧测试照搬（改 import 与配置读取方式），因上述改动不再成立的删去；新增两处修改的手算测试。 - import-linter 加「ceus 不引用其他 cadx 模块」。依赖加 numpy、opencv-python-headless。 Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
397 lines
16 KiB
Python
397 lines
16 KiB
Python
"""CEUS ROI 科研配置 schema + loader 单元测试。
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验证目标：
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1. `load_tracking_config` 读默认 yaml 后返回 `TrackingConfig`，且关键默认值
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等于 findings §2A/§3 的「yaml 生产值」（而非参考代码的保守默认）。
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2. findings §5 硬约束生效（偶数 temporal_window / 面积比逆序 / percentile 越界报错）。
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3. 子模型 `extra="forbid"` 拒绝未知键（防 typo 静默退化）。
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4. findings §2B 死键不在 schema 内（混入即被 extra="forbid" 拒绝）。
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5. design/0030 那几项：合成零点四键已删且残留即报错、`config_version` 必填、
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`pan_source` 校验器、基线默认值等于规范 §3.3。
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"""
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from typing import Any
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import pytest
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from pydantic import ValidationError
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from cadx.ceus import CeusConfig as TrackingConfig
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from conftest import load_ceus_section
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def _merge(base: dict[str, Any], payload: dict[str, Any]) -> dict[str, Any]:
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"""把 payload 逐层盖到 base 上（只盖 payload 里写到的键）。"""
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merged = dict(base)
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for key, value in payload.items():
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if isinstance(value, dict) and isinstance(merged.get(key), dict):
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merged[key] = _merge(merged[key], value) # pyright: ignore[reportUnknownArgumentType]
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else:
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merged[key] = value
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return merged
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def _validate(payload: dict[str, Any]) -> TrackingConfig:
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"""在 config/ceus.yaml 的 ceus 段上盖上 payload 再校验。
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配置不设默认值、每个字段必填；旧测试只写自己关心的那几个键、其余靠默认值，
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这里改为其余键取 config/ceus.yaml 的值。
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"""
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return TrackingConfig.model_validate(_merge(load_ceus_section(), payload))
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def load_tracking_config() -> TrackingConfig:
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"""读 config/ceus.yaml 的 ceus 段（旧测试读的是旧 yaml 整份文件）。"""
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return TrackingConfig.model_validate(load_ceus_section())
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def test_load_default_config_returns_tracking_config() -> None:
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"""默认 yaml 应能加载为 TrackingConfig 实例。"""
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cfg = load_tracking_config()
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assert isinstance(cfg, TrackingConfig)
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def test_parameter_boundary_fraction_cannot_overlap_both_sides() -> None:
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with pytest.raises(ValidationError, match="parameter_boundary_fraction"):
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_validate({"tic_analysis": {"fitting": {"parameter_boundary_fraction": 0.5}}})
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def test_default_values_match_findings_production_values() -> None:
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"""关键默认值须等于 findings §2A/§3 的 yaml 生产值，而非代码保守默认。"""
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cfg = load_tracking_config()
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# findings §2A：删键即静默退化的 14 项中的代表项
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assert cfg.interior_dark_region.enabled is True # 非代码默认 False
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assert cfg.interior_dark_region.analysis_view == "source" # 非 target
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assert cfg.interior_dark_region.exclude_prompt_color is True # 非 False
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assert cfg.interior_dark_region.threshold_method == "auto_ensemble" # 非 otsu
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assert cfg.interior_dark_region.min_area == 300 # 非代码默认 64
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assert cfg.interior_dark_region.min_area_ratio == 0.015 # 非 0.0
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assert cfg.roi_shape.source == "prompt_prior" # 非代码默认 medsam2
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assert cfg.constraints.keyframe_position.enabled is True # 非 False
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# findings §3：其余生产值
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assert cfg.keyframes.iou_threshold == 0.92
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assert cfg.keyframes.min_gap_frames == 1
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assert cfg.smoothing.temporal_window == 15
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assert cfg.smoothing.contour_points == 64
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assert cfg.roi_shape.min_area_ratio_to_prompt == 0.70
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assert cfg.roi_shape.max_area_ratio_to_prompt == 1.25
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# findings §2C/§3.8：暗部方法子参（yaml 未列、代码默认）
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assert cfg.interior_dark_region.percentile == 45
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assert cfg.interior_dark_region.adaptive_block_size == 31
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# design/0044：两条正式病灶曲线使用 Lognormal v2；SG 只做候选检测。
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assert cfg.tic_analysis.fitting.algorithm_version == "lognormal-v2"
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assert cfg.tic_analysis.fitting.candidate_polyorder == 2
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assert cfg.tic_analysis.fitting.multi_peak_minimum_separation_s == 5.0
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assert cfg.tic_analysis.fitting.multi_peak_minimum_relative_height == 0.50
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assert cfg.tic_analysis.fitting.multi_peak_maximum_valley_fraction == 0.25
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assert cfg.tic_analysis.fitting.candidate_window_s == 1.5
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assert cfg.tic_analysis.fitting.detect_duplicate_frames is True
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def test_temporal_window_must_be_odd() -> None:
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"""findings §5：smoothing.temporal_window 须为正奇数，偶数报错。"""
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with pytest.raises(ValidationError):
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_validate({"smoothing": {"temporal_window": 14}})
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def test_adaptive_block_size_must_be_odd() -> None:
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"""findings §5：adaptive_block_size 须为正奇数，偶数报错。"""
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with pytest.raises(ValidationError):
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_validate({"interior_dark_region": {"adaptive_block_size": 30}})
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def test_area_ratio_min_must_be_less_than_max() -> None:
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"""findings §5：min_area_ratio_to_prompt 须 < max，逆序报错。"""
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with pytest.raises(ValidationError):
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_validate(
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{
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"roi_shape": {
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"min_area_ratio_to_prompt": 1.3,
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"max_area_ratio_to_prompt": 1.25,
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}
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}
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)
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def test_percentile_must_be_within_bounds() -> None:
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"""findings §5：暗部 percentile 须 ∈ [0, 100]，越界报错。"""
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with pytest.raises(ValidationError):
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_validate({"interior_dark_region": {"percentile": 150}})
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def test_keyframe_position_strength_clipped_to_unit_interval() -> None:
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"""findings §5：constraints.keyframe_position.strength clip 到 [0, 1]。"""
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cfg = _validate({"constraints": {"keyframe_position": {"strength": 1.8}}})
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assert cfg.constraints.keyframe_position.strength == 1.0
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cfg_neg = _validate({"constraints": {"keyframe_position": {"strength": -0.5}}})
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assert cfg_neg.constraints.keyframe_position.strength == 0.0
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def test_extra_keys_forbidden() -> None:
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"""子模型 extra='forbid'：未知键（含 typo / 死键）报错。"""
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with pytest.raises(ValidationError):
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_validate(
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{"interior_dark_region": {"temporal_window": 9}} # findings §2B 死键
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)
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with pytest.raises(ValidationError):
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_validate({"unknown_top_level_key": 1})
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def test_reference_region_manual_requires_center_xy() -> None:
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"""findings §3.11：reference_region.mode=manual 时 center_xy 必填，缺则报错。"""
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with pytest.raises(ValidationError):
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_validate({"tic_analysis": {"reference_region": {"mode": "manual"}}})
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def test_reference_region_manual_with_center_xy_passes() -> None:
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"""findings §3.11：manual 模式提供 center_xy 即合法。"""
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cfg = _validate(
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{"tic_analysis": {"reference_region": {"mode": "manual", "center_xy": [100.0, 200.0]}}}
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)
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assert cfg.tic_analysis.reference_region.mode == "manual"
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assert cfg.tic_analysis.reference_region.center_xy == [100.0, 200.0]
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def test_invalid_layout_rejected() -> None:
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"""闭集枚举：非法 views.layout 应被 Literal 拒绝（防 typo 穿透）。"""
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with pytest.raises(ValidationError):
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_validate({"views": {"layout": "diagonal"}})
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def test_invalid_threshold_method_rejected() -> None:
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"""闭集枚举：非法 interior_dark_region.threshold_method 应被 Literal 拒绝。"""
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with pytest.raises(ValidationError):
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_validate({"interior_dark_region": {"threshold_method": "foobar"}})
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def test_invalid_reference_region_mode_rejected() -> None:
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"""闭集枚举：非法 reference_region.mode 应被 Literal 拒绝。"""
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with pytest.raises(ValidationError):
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_validate({"tic_analysis": {"reference_region": {"mode": "random"}}})
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# ---------- design/0030 决策二：合成零点那四个键已删，残留即报错 ----------
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@pytest.mark.parametrize(
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"payload",
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[
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{"add_zero_timepoint": True},
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{"shift_frame_times_after_zero": True},
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{"zero_time_sec": 0.0},
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{"smoothing": {"force_zero_start": True}},
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],
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)
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def test_zero_timepoint_keys_are_gone(payload: dict[str, Any]) -> None:
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"""design/0030 决策二：合成零点那四个键已删，残留即被 extra='forbid' 拒掉。
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理由写在 `TicAnalysisConfig` 的 docstring 上（CLAUDE.md §1.6）。
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这条守的只是名字，换个名字把同一个概念加回来它照样绿，所以那两段 docstring 是不可省
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的另一半。
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"""
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with pytest.raises(ValidationError):
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_validate({"tic_analysis": payload})
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def test_anchor_frames_defaults_mirror_contract() -> None:
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"""anchor_frames 段的默认值镜像自《临床口径契约》（2026-08-25 版，同步 2026-09-01）。
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这批数不来自 findings 也不来自工程直觉——动任何一个之前先去 Linear 那边核对。
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钉在测试里是为了防手滑改配置时漏看注释：改了数这条就红，红的含义是「抄本动过了，
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去核对契约」。
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"""
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cfg = load_tracking_config()
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a = cfg.tic_analysis.anchor_frames
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assert a.arrival.baseline_sd_multiplier == 3.0
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assert a.arrival.relative_peak_threshold == 0.10
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assert a.arrival.persistence_s == 0.5
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# 突出度倍数与到达判据倍数是两个独立的键（契约明写改一个不应连带改另一个）。
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assert a.peak_prominence_baseline_sd_multiplier == 3.0
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assert a.baseline_frame_backoff_s == 0.3
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assert a.d1_window_after_s == 0.5
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assert a.d2_window_s == 0.3
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assert a.d3_window_s == 0.5
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# D4/B0 两档契约空着、第 12 题委托工程侧，取曲线锚点档里较宽的一档。
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assert a.d4_window_s == 0.5
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assert a.b0_window_s == 0.5
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assert a.late_phase.preferred_time_s == 60.0
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assert a.late_phase.tolerance_s == 2.0
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assert a.f1_anchor_s == 20.0
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def test_anchor_frames_unknown_key_rejected() -> None:
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"""schema 拒绝未知键：照抄契约时拼错键名在加载配置这一步就报错，不进流水线。"""
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with pytest.raises(ValidationError):
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_validate({"tic_analysis": {"anchor_frames": {"arrival_threshold": 3.0}}})
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def test_yaml_with_leftover_zero_key_fails_to_load() -> None:
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"""yaml 里留着 `add_zero_timepoint` 时加载当场失败，不留兼容路径。"""
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section = load_ceus_section()
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section["tic_analysis"]["add_zero_timepoint"] = True
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with pytest.raises(ValidationError):
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TrackingConfig.model_validate(section)
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# ---------- design/0030 决策十：config_version ----------
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def test_config_version_is_required() -> None:
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"""design/0030 决策十：`config_version` 无默认，缺了直接报错。
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有默认值等于「yaml 里删掉这行也能起来」，那时两批不同参数跑出来的结果落在库里
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长得一模一样，没有任何东西能把它们分开。
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"""
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section = load_ceus_section()
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del section["config_version"]
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with pytest.raises(ValidationError, match="config_version"):
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TrackingConfig.model_validate(section)
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def test_config_version_rejects_empty_string() -> None:
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"""空串在**加载配置这一步**就得被拒，不能等到整条流水线跑完才炸。
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实体 ``CeusRoiTracking`` 上有同一道判据，但那是落库前的最后一关：解码、分割、六趟
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遍历全跑完，走到写库才报错，而这一趟是白跑的。
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"""
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with pytest.raises(ValidationError, match="config_version"):
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_validate({"config_version": ""})
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def test_default_yaml_declares_config_version() -> None:
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"""默认 yaml 顶层给了 `config_version`。
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"4" 起于双曲线 Lognormal v2（design/0044）：拟合与锚点语义发生变化，
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两批产物靠这个号分开（design/0030 决策十）。
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"""
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cfg = load_tracking_config()
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assert cfg.config_version == "4"
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# ---------- design/0030 决策二：基线区间默认值 ----------
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def test_baseline_defaults_match_spec_section_3_3() -> None:
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"""基线两个时长的默认值等于规范 §3.3 给的首选 2 秒 / 最短 1 秒。"""
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cfg = load_tracking_config()
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assert cfg.tic_analysis.baseline.preferred_duration_s == 2.0
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assert cfg.tic_analysis.baseline.minimum_duration_s == 1.0
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# 规范 §3.3 没给稳定性判据，这个数是我们定的占位。
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assert cfg.tic_analysis.baseline.stability_sd_multiplier == 3.0
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def test_baseline_minimum_must_not_exceed_preferred() -> None:
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"""最短时长超过首选时长即报错——那样「退到最短」比首选还长，等于没有退路。"""
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with pytest.raises(ValidationError):
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_validate(
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{
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"tic_analysis": {
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"baseline": {
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"preferred_duration_s": 1.0,
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"minimum_duration_s": 2.0,
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}
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}
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}
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)
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def test_baseline_durations_must_be_positive() -> None:
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"""非正时长即报错（0 秒的基线段算不出 B 与 σ0）。"""
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with pytest.raises(ValidationError):
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_validate({"tic_analysis": {"baseline": {"minimum_duration_s": 0.0}}})
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# ---------- design/0030 决策四：pan_source（紫色轮廓检测器） ----------
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def test_pan_source_defaults_match_default_yaml() -> None:
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"""默认 yaml 里的紫色占位值原样加载（这一组待真实素材标定）。"""
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cfg = load_tracking_config()
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assert cfg.pan_source.hsv_lower == [125, 60, 60]
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assert cfg.pan_source.hsv_upper == [165, 255, 255]
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assert cfg.pan_source.min_area == 2000
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assert cfg.pan_source.min_detected_frame_fraction == 0.9
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# 顶部文字带同绿框那条：紫色轮廓和绿框画在同一画面上。
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assert cfg.pan_source.ignore_regions == cfg.prompt_source.ignore_regions
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@pytest.mark.parametrize("bound", ["hsv_lower", "hsv_upper"])
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def test_pan_source_hsv_must_have_three_components(bound: str) -> None:
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"""HSV 阈值分量数不对即报错（否则要到 cv2.inRange 里才炸）。"""
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with pytest.raises(ValidationError):
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_validate({"pan_source": {bound: [125, 60]}})
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def test_pan_source_hsv_upper_must_not_be_below_lower() -> None:
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"""上下界写反即报错——inRange 不会报错，只会恒返回空掩膜，静默变成「检不到紫色」。"""
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with pytest.raises(ValidationError):
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_validate({"pan_source": {"hsv_lower": [125, 60, 60], "hsv_upper": [120, 255, 255]}})
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def test_pan_source_min_area_must_be_positive() -> None:
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"""min_area 须 ≥1。"""
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with pytest.raises(ValidationError):
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_validate({"pan_source": {"min_area": 0}})
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@pytest.mark.parametrize("fraction", [0.0, -0.1, 1.5])
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def test_pan_source_detected_fraction_out_of_bounds_rejected(fraction: float) -> None:
|
||
"""检出帧占比须 ∈ (0, 1]：取 0 这道门形同虚设，>1 则永远判不出有效。"""
|
||
with pytest.raises(ValidationError):
|
||
_validate({"pan_source": {"min_detected_frame_fraction": fraction}})
|
||
|
||
|
||
def test_pan_source_detected_fraction_accepts_one() -> None:
|
||
"""1.0 合法（虽然默认不取它——一帧漏检就整段作废太脆）。"""
|
||
cfg = _validate({"pan_source": {"min_detected_frame_fraction": 1.0}})
|
||
assert cfg.pan_source.min_detected_frame_fraction == 1.0
|
||
|
||
|
||
# ---------- 任务书 02：配置不设默认值，删掉的旧字段不再接受 ----------
|
||
|
||
|
||
def _leaf_paths(node: dict[str, Any], prefix: tuple[str, ...]) -> list[tuple[str, ...]]:
|
||
paths: list[tuple[str, ...]] = []
|
||
for key, value in node.items():
|
||
if isinstance(value, dict):
|
||
paths.extend(_leaf_paths(value, (*prefix, key))) # pyright: ignore[reportUnknownArgumentType]
|
||
paths.append((*prefix, key))
|
||
return paths
|
||
|
||
|
||
@pytest.mark.parametrize("path", _leaf_paths(load_ceus_section(), ()), ids="/".join)
|
||
def test_every_field_is_required(path: tuple[str, ...]) -> None:
|
||
"""ceus 段删掉任何一个键（含整个子段）都报错：没有一个字段有默认值。"""
|
||
section = load_ceus_section()
|
||
node = section
|
||
for key in path[:-1]:
|
||
node = node[key]
|
||
del node[path[-1]]
|
||
with pytest.raises(ValidationError):
|
||
TrackingConfig.model_validate(section)
|
||
|
||
|
||
@pytest.mark.parametrize(
|
||
"payload",
|
||
[
|
||
{"views": {"source_view": "left"}},
|
||
{"views": {"target_view": "right"}},
|
||
{"views": {"effective_region": {"type": "full"}}},
|
||
{"mapping": {"type": "normalized_view_coordinates", "anchor_points": []}},
|
||
],
|
||
)
|
||
def test_removed_fields_are_rejected(payload: dict[str, Any]) -> None:
|
||
"""造影在哪一半、裁黑边、映射锚点这几个旧字段已删，写了就报错。"""
|
||
with pytest.raises(ValidationError):
|
||
_validate(payload)
|
||
|
||
|
||
def test_config_is_frozen() -> None:
|
||
cfg = load_tracking_config()
|
||
with pytest.raises(ValidationError):
|
||
cfg.keyframes.iou_threshold = 0.5 # pyright: ignore[reportAttributeAccessIssue]
|